List of works - Karolina L Tkaczuk

A cold-adapted esterase from psychrotrophic Pseudoalteromas sp. strain 643A.

scientific article

Assessing the accuracy of template-based structure prediction metaservers by comparison with structural genomics structures

scientific article

Crystal structure of a putative isochorismatase hydrolase from Oleispira antarctica

scientific article

Crystal structure of the Escherichia coli 23S rRNA:m5C methyltransferase RlmI (YccW) reveals evolutionary links between RNA modification enzymes

scientific article

Crystal structures of putative phosphoglycerate kinases from B. anthracis and C. jejuni

scientific article

FRankenstein becomes a cyborg: the automatic recombination and realignment of fold recognition models in CASP6.

scientific article published in January 2005

Functional specialization of domains tandemly duplicated within 16S rRNA methyltransferase RsmC

scientific article

Identification and molecular modeling of a novel lipase from an Antarctic soil metagenomic library

scientific article

Identification of the csp gene and molecular modelling of the CspA-like protein from Antarctic soil-dwelling psychrotrophic bacterium Psychrobacter sp. B6.

scientific article published on 24 February 2009

Modeling and experimental analyses reveal a two-domain structure and amino acids important for the activity of aminoglycoside resistance methyltransferase Sgm.

scientific article

Molecular phylogenetics and comparative modeling of HEN1, a methyltransferase involved in plant microRNA biogenesis

scientific article

New archaeal methyltransferases forming 1-methyladenosine or 1-methyladenosine and 1-methylguanosine at position 9 of tRNA.

scientific article

Structural and evolutionary bioinformatics of the SPOUT superfamily of methyltransferases

scientific article published on 5 March 2007

Structural and functional insight into the universal stress protein family

scientific article

Structural basis for the methylation of G1405 in 16S rRNA by aminoglycoside resistance methyltransferase Sgm from an antibiotic producer: a diversity of active sites in m7G methyltransferases

scientific article

Structural characterization of the putative ABC-type 2 transporter from Thermotoga maritima MSB8.

scientific article

The YqfN protein of Bacillus subtilis is the tRNA: m1A22 methyltransferase (TrmK)

scientific journal article

The crystal structure of Escherichia coli spermidine synthase SpeE reveals a unique substrate-binding pocket

scientific article

The crystal structure of pyrimidine/thiamin biosynthesis precursor-like domain-containing protein CAE31940 from proteobacterium Bordetella bronchiseptica RB50, and evolutionary insight into the NMT1/THI5 family

scientific article

The yfhQ gene of Escherichia coli encodes a tRNA:Cm32/Um32 methyltransferase

scientific article

Trm13p, the tRNA:Xm4 modification enzyme from Saccharomyces cerevisiae is a member of the Rossmann-fold MTase superfamily: prediction of structure and active site

scientific article

List of works by Karolina L Tkaczuk

A cold-adapted esterase from psychrotrophic Pseudoalteromas sp. strain 643A.

Assessing the accuracy of template-based structure prediction metaservers by comparison with structural genomics structures

Crystal structure of a putative isochorismatase hydrolase from Oleispira antarctica

Crystal structure of the Escherichia coli 23S rRNA:m5C methyltransferase RlmI (YccW) reveals evolutionary links between RNA modification enzymes

Crystal structures of putative phosphoglycerate kinases from B. anthracis and C. jejuni

FRankenstein becomes a cyborg: the automatic recombination and realignment of fold recognition models in CASP6.

Functional specialization of domains tandemly duplicated within 16S rRNA methyltransferase RsmC

Identification and molecular modeling of a novel lipase from an Antarctic soil metagenomic library

Identification of the csp gene and molecular modelling of the CspA-like protein from Antarctic soil-dwelling psychrotrophic bacterium Psychrobacter sp. B6.

Modeling and experimental analyses reveal a two-domain structure and amino acids important for the activity of aminoglycoside resistance methyltransferase Sgm.

Molecular phylogenetics and comparative modeling of HEN1, a methyltransferase involved in plant microRNA biogenesis

New archaeal methyltransferases forming 1-methyladenosine or 1-methyladenosine and 1-methylguanosine at position 9 of tRNA.

Structural and evolutionary bioinformatics of the SPOUT superfamily of methyltransferases

Structural and functional insight into the universal stress protein family

Structural basis for the methylation of G1405 in 16S rRNA by aminoglycoside resistance methyltransferase Sgm from an antibiotic producer: a diversity of active sites in m7G methyltransferases

Structural characterization of the putative ABC-type 2 transporter from Thermotoga maritima MSB8.

The YqfN protein of Bacillus subtilis is the tRNA: m1A22 methyltransferase (TrmK)

The crystal structure of Escherichia coli spermidine synthase SpeE reveals a unique substrate-binding pocket

The crystal structure of pyrimidine/thiamin biosynthesis precursor-like domain-containing protein CAE31940 from proteobacterium Bordetella bronchiseptica RB50, and evolutionary insight into the NMT1/THI5 family

The yfhQ gene of Escherichia coli encodes a tRNA:Cm32/Um32 methyltransferase

Trm13p, the tRNA:Xm4 modification enzyme from Saccharomyces cerevisiae is a member of the Rossmann-fold MTase superfamily: prediction of structure and active site