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List of works by Robert E. Bruccoleri

A V kappa-J kappa junctional change in an antidigoxin recombinant antibody destroys digoxin-binding activity

scientific article published in October 1990

Ab initio loop modeling and its application to homology modeling

scientific article published on 01 January 2000

Altered hapten recognition by two anti-digoxin hybridoma variants due to variable region point mutations.

scientific article published on March 1991

An analysis of incorrectly folded protein models. Implications for structure predictions.

scientific article published in August 1984

An improved algorithm for nucleic acid secondary structure display

scientific article published in March 1988

Antigenic determinants in proteins coincide with surface regions accessible to large probes (antibody domains).

scientific article published on January 1986

Antigenicity of myohemerythrin

scientific article published on 01 December 1987

Application of a directed conformational search for generating 3-D coordinates for protein structures from alpha-carbon coordinates

scientific article published on December 1, 1992

CHARMM: A program for macromolecular energy, minimization, and dynamics calculations

scientific article published in 1983

Characterization of an anti-digoxin antibody binding site by site-directed in vitro mutagenesis

scientific article published on 01 March 1993

Computer analysis of mutations that affect antibody specificity

scientific article published on January 1990

Concordance analysis of microbial genomes

scientific article published on October 1998

Conformational sampling using high-temperature molecular dynamics

scientific article published on 01 December 1990

Conserved fungal genes as potential targets for broad-spectrum antifungal drug discovery

scientific article

Contribution of a single heavy chain residue to specificity of an anti-digoxin monoclonal antibody

scientific article

Correlation among sites of limited proteolysis, enzyme accessibility and segmental mobility

scientific article published on 01 January 1987

Criteria that discriminate between native proteins and incorrectly folded models

scientific article published on 01 January 1988

Decatransin, a new natural product inhibiting protein translocation at the Sec61/SecYEG translocon

scientific article

Domain association in immunoglobulin molecules. The packing of variable domains

scientific article

Duplicated Enhancer Region Increases Expression of CTSB and Segregates with Keratolytic Winter Erythema in South African and Norwegian Families.

scientific article published on 26 April 2017

Effect of heavy chain signal peptide mutations and NH2-terminal chain length on binding of anti-digoxin antibodies

scientific article

Empirical free energy calculations of phage 434 repressor- and cro-DNA complexes support the 'indirect readout' hypothesis of specificity

scientific article

Empirical free energy calculations: a blind test and further improvements to the method.

scientific article published in May 1997

FDR-FET: an optimizing gene set enrichment analysis method

scientific article published on 15 March 2011

Factors influencing accuracy of computer-built models: a study based on leucine zipper GCN4 structure

scientific article published on March 1996

Heavy chain position 50 is a determinant of affinity and specificity for the anti-digoxin antibody 26-10 ⬇️

scientific article published on October 15, 1993

High-resolution solution structure of siamycin II: novel amphipathic character of a 21-residue peptide that inhibits HIV fusion

scientific article published on 01 April 1995

Homology modeling using simulated annealing of restrained molecular dynamics and conformational search calculations with CONGEN: application in predicting the three-dimensional structure of murine homeodomain Msx-1.

scientific article

Identification and application of threonine aldolase for synthesis of valuable α-amino, β-hydroxy-building blocks

scientific article published on 15 November 2019

J-Coupling Restraint Potentials for Nonstereospecifically Assigned Methylene Protons and Ensemble-Average Calculations ⬇️

scientific article published on August 1, 1995

Modeling the antigen combining site of an anti-dinitrophenyl antibody, ANO2 ⬇️

scientific article published on November 1, 1992

Modulation of antibody affinity by a non-contact residue

scientific article

Molecular anatomy of the antibody binding site

scientific article published in Journal of Biological Chemistry

On the attribution of binding energy in antigen-antibody complexes McPC 603, D1.3, and HyHEL-5.

scientific article

On the molecular nature of "restrictive" antigenic elements present on major histocompatibility complex (MHC) proteins

scientific article published on February 1989

Prediction of the folding of short polypeptide segments by uniform conformational sampling

scientific article published on 01 January 1987

Protein antigenicity: a static surface property

scientific article

Protein engineering of antibody binding sites: recovery of specific activity in an anti-digoxin single-chain Fv analogue produced in Escherichia coli

scientific article

Response to G. F. King

article by Liyang Shen et al published 1 August 1996 in Biophysical Journal

SDRS--an algorithm for analyzing large-scale dose-response data

scientific article

Simulated annealing with restrained molecular dynamics using CONGEN: energy refinement of the NMR solution structures of epidermal and type-alpha transforming growth factors

scientific article

Simulated annealing with restrained molecular dynamics using a flexible restraint potential: theory and evaluation with simulated NMR constraints.

scientific article

Solution conformation of a cyclic pentapeptide endothelin antagonist. Comparison of structures obtained from constrained dynamics and conformational search

scientific article published on March 16, 1992

Spatially constrained minimization of macromolecules

scientific article published on 01 April 1986

Stabilities of leucine zipper dimers estimated by an empirical free energy method ⬇️

scientific article published on September 1, 1991

Structure of antibody hypervariable loops reproduced by a conformational search algorithm ⬇️

scientific article published on October 6, 1988

Structure-function studies of the herpes simplex virus type 1 DNA polymerase.

scientific article published on October 1990

The hinge-bending mode of a lysozyme-inhibitor complex

scientific article

The specificity properties that distinguish members of a set of homologous anti-digoxin antibodies are controlled by H chain mutations

scientific article published on 01 January 1991

Transcriptional profiling of the dose response: a more powerful approach for characterizing drug activities

scientific article

Twisted hyperboloid (Strophoid) as a model of beta-barrels in proteins

scientific article

Two-stranded alpha-helical coiled-coils of fibrous proteins: theoretical analysis of supercoil formation

scientific article published on January 1986

Unzipping Natural Products: Improved Natural Product Structure Predictions by Ensemble Modeling and Fingerprint Matching

antiSMASH 3.0-a comprehensive resource for the genome mining of biosynthetic gene clusters

scientific article published on 6 May 2015

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