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List of works by Hideyuki Tamaki

"Duckweed-Microbe Co-Cultivation Method" for Isolating a Wide Variety of Microbes Including Taxonomically Novel Microbes

scientific article published on 07 November 2018

A Novel Quorum-Quenching N-Acylhomoserine Lactone Acylase from Acidovorax sp. Strain MR-S7 Mediates Antibiotic Resistance

scientific article

A Six-well Plate Method: Less Laborious and Effective Method for Cultivation of Obligate Anaerobic Microorganisms ⬇️

scientific article published on June 16, 2011

A distinct freshwater‐adapted subgroup of ANME‐1 dominates active archaeal communities in terrestrial subsurfaces in Japan ⬇️

scientific article published on June 8, 2011

A hidden pitfall in the preparation of agar media undermines microorganism cultivability

scientific article

A novel laccase with urate oxidation activity from Lysobacter sp. T-15.

scientific article published on 29 July 2010

Aggregatilinea lenta gen. nov., sp. nov., a slow-growing, facultatively anaerobic bacterium isolated from subseafloor sediment, and proposal of the new order Aggregatilineales ord. nov. within the class Anaerolineae of the phylum Chloroflexi

scientific article published in April 2019

An iron corrosion-assisted H2-supplying system: a culture method for methanogens and acetogens under low H2 pressures

scientific article published on 05 November 2020

Analysis of 16S rRNA amplicon sequencing options on the Roche/454 next-generation titanium sequencing platform

scientific article

Aquabacterium pictum sp. nov., the first aerobic bacteriochlorophyll a-containing fresh water bacterium in the genus Aquabacterium of the class Betaproteobacteria

scientific article

Armatimonas rosea gen. nov., sp. nov., of a novel bacterial phylum, Armatimonadetes phyl. nov., formally called the candidate phylum OP10.

scientific article

Burkholderia insecticola sp. nov., a gut symbiotic bacterium of the bean bug Riptortus pedestris

scientific article published on 04 June 2018

Candidatus Methanogranum caenicola: a novel methanogen from the anaerobic digested sludge, and proposal of Methanomassiliicoccaceae fam. nov. and Methanomassiliicoccales ord. nov., for a methanogenic lineage of the class Thermoplasmata

scientific article

Carbon dioxide concentration dictates alternative methanogenic pathways in oil reservoirs.

scientific article

Catenisphaera adipataccumulans gen. nov., sp. nov., a member of the family Erysipelotrichaceae isolated from an anaerobic digester

scientific article

Comparative Analysis of Microbial Communities in Fronds and Roots of Three Duckweed Species: Spirodela polyrhiza, Lemna minor, and Lemna aequinoctialis

scientific article published on 01 January 2020

Comparative Genomics of Syntrophic Branched-Chain Fatty Acid Degrading Bacteria

scientific article published on 16 July 2016

Comparative analysis of bacterial diversity in freshwater sediment of a shallow eutrophic lake by molecular and improved cultivation-based techniques

scientific article published in April 2005

Complete Genome Sequence of Methanolinea tarda NOBI-1T, a Hydrogenotrophic Methanogen Isolated from Methanogenic Digester Sludge

scientific article

Complete Genome Sequence of Methanoregula formicica SMSPT, a Mesophilic Hydrogenotrophic Methanogen Isolated from a Methanogenic Upflow Anaerobic Sludge Blanket Reactor

scientific article

Complete Genome Sequence of the Intracellular Bacterial Symbiont TC1 in the Anaerobic Ciliate Trimyema compressum

scientific article published on 22 September 2016

Coprinopsis cinerea from rice husks forming sclerotia in agar culture ⬇️

scientific article published in 2011

Crenotalea thermophila gen. nov., sp. nov., a member of the family Chitinophagaceae isolated from a hot spring

scientific article

Culture-Dependent and Independent Analyses of the Microbial Communities Inhabiting the Giant Duckweed (Spirodela polyrrhiza) Rhizoplane and Isolation of a Variety of Rarely Cultivated Organisms within the Phylum Verrucomicrobia ⬇️

scientific article published on January 1, 2010

Degradation behaviors of nonylphenol ethoxylates by isolated bacteria using improved isolation method

scientific article published on 01 January 2008

Desulfovibrio marinisediminis sp. nov., a novel sulfate-reducing bacterium isolated from coastal marine sediment via enrichment with Casamino acids

scientific article

Detection and isolation of plant-associated bacteria scavenging atmospheric molecular hydrogen.

scientific article published on 4 December 2015

Dethiosulfatibacter aminovorans gen. nov., sp. nov., a novel thiosulfate-reducing bacterium isolated from coastal marine sediment via sulfate-reducing enrichment with Casamino acids

scientific article

Development of a genotyping method for potato scab pathogens based on multiplex PCR.

scientific article

Discovery of glycoside hydrolase enzymes in an avicel-adapted forest soil fungal community by a metatranscriptomic approach

scientific article

Diversity and geochemical community assembly processes of the living rare biosphere in a sand-and-gravel aquifer ecosystem in the Midwestern United States

scientific article published on 17 September 2019

Draft Genome Sequence of "Candidatus Phytoplasma asteris" Strain OY-V, an Unculturable Plant-Pathogenic Bacterium

scientific article

Draft Genome Sequence of Syntrophomonas wolfei subsp. methylbutyratica Strain 4J5T (JCM 14075), a Mesophilic Butyrate- and 2-Methylbutyrate-Degrading Syntroph.

scientific article published on 3 March 2016

Draft Genome Sequence of Syntrophorhabdus aromaticivorans Strain UI, a Mesophilic Aromatic Compound-Degrading Syntroph

scientific article published on 06 February 2014

Draft Genome Sequences of Methanoculleus horonobensis Strain JCM 15517, Methanoculleus thermophilus Strain DSM 2373, and Methanofollis ethanolicus Strain JCM 15103, Hydrogenotrophic Methanogens Belonging to the Family Methanomicrobiaceae

scientific article published on 31 March 2016

Effect of gelling agent on colony formation in solid cultivation of microbial community in lake sediment

scientific article published on 18 March 2009

Effects of the Wastewater Flow Rate on Interactions between the Genus Nitrosomonas and Diverse Populations in an Activated Sludge Microbiome

scientific article published on 22 December 2018

Flavobacterium limicola sp. nov., a psychrophilic, organic-polymer-degrading bacterium isolated from freshwater sediments ⬇️

scientific article published on March 1, 2003

Fusimonas intestini gen. nov., sp. nov., a novel intestinal bacterium of the family Lachnospiraceae associated with diabetes in mice

scientific article

Genomic composition and dynamics among Methanomicrobiales predict adaptation to contrasting environments

scientific article published on 23 August 2016

Granulicella cerasi sp. nov., an acidophilic bacterium isolated from cherry bark

scientific article

Granulimonas faecalis gen. nov., sp. nov., and Leptogranulimonas caecicola gen. nov., sp. nov., novel lactate-producing Atopobiaceae bacteria isolated from mouse intestines, and an emended description of the family Atopobiaceae

scientific article published in 2022

Halomonas sulfidaeris-dominated microbial community inhabits a 1.8 km-deep subsurface Cambrian Sandstone reservoir.

scientific article

In Situ Gene Expression Responsible for Sulfide Oxidation and CO2 Fixation of an Uncultured Large Sausage-Shaped Aquificae Bacterium in a Sulfidic Hot Spring

scientific article published on 07 June 2016

Isolation and characterization of Flexilinea flocculi gen. nov., sp. nov., a filamentous anaerobic bacterium belonging to the class Anaerolineae in the phylum Chloroflexi

scientific article published on 4 December 2015

Isolation and characterization of antagonistic fungi against potato scab pathogens from potato field soils

scientific article published on April 2010

Isolation of Novel Bacteria Including Rarely Cultivated Phyla, Acidobacteria and Verrucomicrobia, from the Roots of Emergent Plants by Simple Culturing Method

scientific article published on 22 July 2017

Isolation of Previously Uncultured Slow-Growing Bacteria by Using a Simple Modification in the Preparation of Agar Media

scientific article published on 17 September 2018

Isolation of a member of the candidate phylum 'Atribacteria' reveals a unique cell membrane structure

scientific article published on 14 December 2020

Isolation of an archaeon at the prokaryote-eukaryote interface

scientific article published on 15 January 2020

Isolation of butanol- and isobutanol-tolerant bacteria and physiological characterization of their butanol tolerance

scientific article

Koleobacter methoxysyntrophicus gen. nov., sp. nov., a novel anaerobic bacterium isolated from deep subsurface oil field and proposal of Koleobacteraceae fam. nov. and Koleobacterales ord. nov. within the class Clostridia of the phylum Firmicutes

scientific article published on 10 November 2020

Lentimicrobium saccharophilum gen. nov., sp. nov., a strictly anaerobic bacterium representing a new family in the phylum Bacteroidetes, and proposal of Lentimicrobiaceae fam. nov.

scientific article

Long-Read-Resolved, Ecosystem-Wide Exploration of Nucleotide and Structural Microdiversity of Lake Bacterioplankton Genomes

scientific article published in 2022

MS2 bacteriophage reduction and microbial communities in biosand filters.

scientific article

Metagenomic analysis of DNA viruses in a wastewater treatment plant in tropical climate

scientific article published on 31 October 2011

Metagenomic and biochemical characterizations of sulfur oxidation metabolism in uncultured large sausage-shaped bacterium in hot spring microbial mats

scientific article

Metagenomic characterization of 'Candidatus Defluviicoccus tetraformis strain TFO71', a tetrad-forming organism, predominant in an anaerobic-aerobic membrane bioreactor with deteriorated biological phosphorus removal.

scientific article published on 20 February 2014

Methane production from coal by a single methanogen

scientific article published in October 2016

Methanogenic archaea use a bacteria-like methyltransferase system to demethoxylate aromatic compounds

scientific article published on 18 June 2021

Methanolobus profundi sp. nov., a methylotrophic methanogen isolated from deep subsurface sediments in a natural gas field

scientific article

Methanomicrobium antiquum sp. nov., a hydrogenotrophic methanogen isolated from deep sedimentary aquifers in a natural gas field.

scientific article

Methanothermobacter tenebrarum sp. nov., a hydrogenotrophic, thermophilic methanogen isolated from gas-associated formation water of a natural gas field ⬇️

scientific article published on May 4, 2012

Microbial Community Analysis in the Roots of Aquatic Plants and Isolation of Novel Microbes Including an Organism of the Candidate Phylum OP10 ⬇️

scientific article published on January 1, 2012

Microbial basis of Fusarium wilt suppression by Allium cultivation

scientific article published in Scientific Reports

Microbial community structure of relict niter-beds previously used for saltpeter production

scientific article

Microbial diversity and methanogenic potential in a high temperature natural gas field in Japan

scientific article

Novel -Acyl Homoserine Lactone-Degrading Bacteria Isolated From Penicillin-Contaminated Environments and Their Quorum-Quenching Activities

scientific article published in 2019

Novel energy conservation strategies and behaviour of Pelotomaculum schinkii driving syntrophic propionate catabolism

scientific article published on 30 October 2018

Petrothermobacter organivorans gen. nov., sp. nov., a thermophilic, strictly anaerobic bacterium of the phylum Deferribacteres isolated from a deep subsurface oil reservoir

scientific article published on 12 September 2017

Phylogenetic Relationship of Symbiotic Archaea in the Gut of the Higher Termite Nasutitermes takasagoensis Fed with Various Carbon Sources

scholarly article by Ryo Miyata et al published 2007 in Microbes and environments / JSME

Phylogenetic analysis and fluorescence in situ hybridization detection of archaeal and bacterial endosymbionts in the anaerobic ciliate trimyema compressum

scientific article published on 29 April 2007

Primary simple assays of cellulose-degrading fungi ⬇️

scientific article published in 2012

Shinella yambaruensis sp. nov., a 3-methyl-sulfolane-assimilating bacterium isolated from soil

scientific article

Unique H2-utilizing lithotrophy in serpentinite-hosted systems

scientific article published in 2022

pH-induced change in cell susceptibility to butanol in a high butanol-tolerant bacterium, Enterococcus faecalis strain CM4A.

scientific article published on 17 April 2015

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