List of works - Céline Noirot

A comparative transcriptomic approach to understanding the formation of cork

scientific article

A search for small noncoding RNAs in Staphylococcus aureus reveals a conserved sequence motif for regulation

scientific article

A unigene set for European beech (Fagus sylvatica L.) and its use to decipher the molecular mechanisms involved in dormancy regulation

scientific article

Assessment of replicate bias in 454 pyrosequencing and a multi-purpose read-filtering tool ⬇️

scientific article

Bioinformatic analysis of ESTs collected by Sanger and pyrosequencing methods for a keystone forest tree species: oak

scientific article

Complete Genome Sequence and Annotation of the Staphylococcus aureus Strain HG001.

scientific article published on 10 August 2017

Daily transcriptomes of the copepod Calanus finmarchicus during the summer solstice at high Arctic latitudes

scientific article published on 24 November 2020

De Novo sequencing and transcriptome analysis for Tetramorium bicarinatum: a comprehensive venom gland transcriptome analysis from an ant species

scientific article

De novo assembly of maritime pine transcriptome: implications for forest breeding and biotechnology.

scientific article

De novo sequencing of Astyanax mexicanus surface fish and Pachón cavefish transcriptomes reveals enrichment of mutations in cavefish putative eye genes

scientific article

Detection of genes involved in bud phenology in sessile oak (Quercus petraea Matt. Liebl) combining digital expression analysis and Q-PCR.

scientific article

Evidence for Late Pleistocene origin of Astyanax mexicanus cavefish

article

Evidence for late Pleistocene origin of Astyanax mexicanus cavefish.

scientific article published on 18 April 2018

Generation and characterization of the sea bass Dicentrarchus labrax brain and liver transcriptomes.

scientific article

High-density linkage mapping in a pine tree reveals a genomic region associated with inbreeding depression and provides clues to the extent and distribution of meiotic recombination

scientific article

Interoperability with Moby 1.0--it's better than sharing your toothbrush!

scientific article

Jflow: a workflow management system for web applications

scientific article published on 10 October 2015

LeARN: a platform for detecting, clustering and annotating non-coding RNAs

scientific article

Mining for hemicellulases in the fungus-growing termite Pseudacanthotermes militaris using functional metagenomics

scientific article

NG6: Integrated next generation sequencing storage and processing environment

scientific article

Non PCR-amplified Transcripts and AFLP fragments as reduced representations of the quail genome for 454 Titanium sequencing

scientific article

Pyrosequencing-based transcriptomic resources in the pond snail Lymnaea stagnalis, with a focus on genes involved in molecular response to diquat-induced stress

scientific article published on 20 July 2012

RNA editing in acute myeloid leukaemia with normal karyotype

scientific article published on 07 August 2015

RNA-Seq reveals genotype-specific molecular responses to water deficit in eucalyptus

scientific article

RNAbrowse: RNA-Seq de novo assembly results browser

scientific article

Reprogramming of DNA methylation is critical for nodule development in Medicago truncatula

article

Sequencing and characterization of a multi-organ Arctic charr transcriptome: A toolbox for investigating polymorphism and seasonal life in a high Arctic fish

scientific article published on 21 April 2016

The BioMart community portal: an innovative alternative to large, centralized data repositories

scientific article (publication date: July 2015)

The Medicago genome provides insight into the evolution of rhizobial symbioses

scientific article

The genome of the white-rot fungus Pycnoporus cinnabarinus: a basidiomycete model with a versatile arsenal for lignocellulosic biomass breakdown

scientific article

The oak gene expression atlas: insights into Fagaceae genome evolution and the discovery of genes regulated during bud dormancy release

scientific article

Transcriptional profiling of bud dormancy induction and release in oak by next-generation sequencing

scientific article

Whole blood transcriptome analysis reveals potential competition in metabolic pathways between negative energy balance and response to inflammatory challenge.

scientific article published on 24 May 2017

List of works by Céline Noirot

A comparative transcriptomic approach to understanding the formation of cork

A search for small noncoding RNAs in Staphylococcus aureus reveals a conserved sequence motif for regulation

A unigene set for European beech (Fagus sylvatica L.) and its use to decipher the molecular mechanisms involved in dormancy regulation

Assessment of replicate bias in 454 pyrosequencing and a multi-purpose read-filtering tool ⬇️

Bioinformatic analysis of ESTs collected by Sanger and pyrosequencing methods for a keystone forest tree species: oak

Complete Genome Sequence and Annotation of the Staphylococcus aureus Strain HG001.

Daily transcriptomes of the copepod Calanus finmarchicus during the summer solstice at high Arctic latitudes

De Novo sequencing and transcriptome analysis for Tetramorium bicarinatum: a comprehensive venom gland transcriptome analysis from an ant species

De novo assembly of maritime pine transcriptome: implications for forest breeding and biotechnology.

De novo sequencing of Astyanax mexicanus surface fish and Pachón cavefish transcriptomes reveals enrichment of mutations in cavefish putative eye genes

Detection of genes involved in bud phenology in sessile oak (Quercus petraea Matt. Liebl) combining digital expression analysis and Q-PCR.

Evidence for Late Pleistocene origin of Astyanax mexicanus cavefish

Evidence for late Pleistocene origin of Astyanax mexicanus cavefish.

Generation and characterization of the sea bass Dicentrarchus labrax brain and liver transcriptomes.

High-density linkage mapping in a pine tree reveals a genomic region associated with inbreeding depression and provides clues to the extent and distribution of meiotic recombination

Interoperability with Moby 1.0--it's better than sharing your toothbrush!

Jflow: a workflow management system for web applications

LeARN: a platform for detecting, clustering and annotating non-coding RNAs

Mining for hemicellulases in the fungus-growing termite Pseudacanthotermes militaris using functional metagenomics

NG6: Integrated next generation sequencing storage and processing environment

Non PCR-amplified Transcripts and AFLP fragments as reduced representations of the quail genome for 454 Titanium sequencing

Pyrosequencing-based transcriptomic resources in the pond snail Lymnaea stagnalis, with a focus on genes involved in molecular response to diquat-induced stress

RNA editing in acute myeloid leukaemia with normal karyotype

RNA-Seq reveals genotype-specific molecular responses to water deficit in eucalyptus

RNAbrowse: RNA-Seq de novo assembly results browser

Reprogramming of DNA methylation is critical for nodule development in Medicago truncatula

Sequencing and characterization of a multi-organ Arctic charr transcriptome: A toolbox for investigating polymorphism and seasonal life in a high Arctic fish

The BioMart community portal: an innovative alternative to large, centralized data repositories

The Medicago genome provides insight into the evolution of rhizobial symbioses

The genome of the white-rot fungus Pycnoporus cinnabarinus: a basidiomycete model with a versatile arsenal for lignocellulosic biomass breakdown

The oak gene expression atlas: insights into Fagaceae genome evolution and the discovery of genes regulated during bud dormancy release

Transcriptional profiling of bud dormancy induction and release in oak by next-generation sequencing

Whole blood transcriptome analysis reveals potential competition in metabolic pathways between negative energy balance and response to inflammatory challenge.