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List of works by Tareq Malas

Characterisation of transcription factor profiles in polycystic kidney disease (PKD): identification and validation of STAT3 and RUNX1 in the injury/repair response and PKD progression

scientific article published on 26 November 2019

Comparative transcriptomics of shear stress treated Pkd1 cells and pre-cystic kidneys reveals pathways involved in early polycystic kidney disease

scientific article published on 01 October 2018

Comprehensive evaluation of Toxoplasma gondii VEG and Neospora caninum LIV genomes with tachyzoite stage transcriptome and proteome defines novel transcript features

scientific article

Comprehensive transcriptome analysis of fluid shear stress altered gene expression in renal epithelial cells

scientific article

Drug prioritization using the semantic properties of a knowledge graph

scientific article published on 18 April 2019

Early career researchers want Open Science.

scientific article published on 15 November 2017

Genomic analysis of the causative agents of coccidiosis in domestic chickens

scientific article

Genomic expression catalogue of a global collection of BCG vaccine strains show evidence for highly diverged metabolic and cell-wall adaptations

scientific article

Integrated transcriptomic and proteomic analysis of pathogenic mycobacteria and their esx-1 mutants reveal secretion-dependent regulation of ESX-1 substrates and WhiB6 as a transcriptional regulator

scientific article published in PLoS ONE

Meta-analysis of polycystic kidney disease expression profiles defines strong involvement of injury repair processes.

scientific article

Nanopublications: A Growing Resource of Provenance-Centric Scientific Linked Data ⬇️

article published in 2018

Nanopublications: A Growing Resource of Provenance-Centric Scientific Linked Data

Prioritization of novel ADPKD drug candidates from disease-stage specific gene expression profiles

scientific article published on 24 December 2019

Rhizosphere microbiome metagenomics of gray mangroves (Avicennia marina) in the Red Sea.

scientific article published on 14 October 2015

Semantic Knowledge Graph Network Features for Drug Repurposing ⬇️

The evolutionary dynamics of variant antigen genes in Babesia reveal a history of genomic innovation underlying host-parasite interaction

scientific article

WhiB6 is required for the secretion-dependent regulation of ESX-1 substrates in pathogenic mycobacteria

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