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List of works by Jean-Philippe Doyon

Algorithms for Exploring the Space of Gene Tree/Species Tree Reconciliations

article

An efficient method for exploring the space of gene tree/species tree reconciliations in a probabilistic framework

scientific article

Branch-and-bound approach for parsimonious inference of a species tree from a set of gene family trees

scientific article published in January 2011

Gene family evolution by duplication, speciation, and loss

scientific article published in October 2008

Inferring gene duplications, transfers and losses can be done in a discrete framework

scientific article

Models, algorithms and programs for phylogeny reconciliation

scientific article published on September 2011

Reconciliation and local gene tree rearrangement can be of mutual profit

scientific article (publication date: 8 April 2013)

Space of gene/species trees reconciliations and parsimonious models

scientific article published in October 2009

SylvX: a viewer for phylogenetic tree reconciliations

scientific article published on 29 October 2015

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