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List of works by Seungchan Kim

A method to reduce ancestry related germline false positives in tumor only somatic variant calling

scientific article published on 19 October 2017

A nonlinear discrete dynamical model for transcriptional regulation: construction and properties

scientific article published on April 2004

AKT pathway genes define 5 prognostic subgroups in glioblastoma

scientific article

ATPS-16IDENTIFICATION OF CLINICALLY RELEVANT DRUGS FOR GLIOBLASTOMA WITH SPECIFIC MOLECULAR SIGNATURE USING CHEMICAL BIOLOGY FINGERPRINTING.

scientific article published on 9 November 2015

Adrenocortical carcinoma survival rates correlated to genomic copy number variants

scientific article published in February 2008

Biomarkers associated with metastasis of lung cancer to brain predict patient survival

scientific article published on January 1, 2011

CONTEXT OF VULNERABILITY OF GBM: DESCRIPTIVE GENOMICS LEADING TO EMPIRIC THERAPEUTICS.

scientific article published in July 2014

CSIG-08NITROSOUREAS IMPROVE SURVIVAL IN THE SECONDARY-LIKE AKT SUBTYPE OF GLIOBLASTOMA.

scientific article

Calcium-influx increases SOD1 aggregates via nitric oxide in cultured motor neurons

scientific article published on October 2007

Clustering context-specific gene regulatory networks.

scientific article published in January 2010

Coefficient of determination in nonlinear signal processing

article

Comparison of gene regulatory networks via steady-state trajectories

scientific article published on January 2007

Comprehensive Pan-Genomic Characterization of Adrenocortical Carcinoma

scientific article

Comprehensive Pan-Genomic Characterization of Adrenocortical Carcinoma

article

Context-specific gene regulations in cancer gene expression data.

scientific article

Context-specific gene regulatory networks subdivide intrinsic subtypes of breast cancer

scientific article

Contextualization of drug-mediator relations using evidence networks

scientific article

Corrected small-sample estimation of the Bayes error

scientific article published in May 2003

DIFFERENTIAL PATHWAY DEPENDENCY DISCOVERY ASSOCIATED WITH DRUG RESPONSE ACROSS CANCER CELL LINES.

scientific article published on January 2016

DNA methylation in multiple myeloma is weakly associated with gene transcription

scientific article

Differential Response of Glioma Stem Cells to Arsenic Trioxide Therapy Is Regulated by MNK1 and mRNA Translation

scientific article

EDDY: a novel statistical gene set test method to detect differential genetic dependencies

scientific article

Extracellular microRNAs in blood differentiate between ischaemic and haemorrhagic stroke subtypes

scientific article published on 24 January 2020

Fuzzy c-means clustering with prior biological knowledge

scientific article published on 24 May 2008

GENO-13NETWORK-BASED APPROACH AIDS IN THE DISCOVERY OF CONTEXT-SPECIFIC DRUGGABLE TARGETS FOR TREATMENT OF GLIOBLASTOMA.

scientific article

Gene expression profile in multiple sclerosis patients and healthy controls: identifying pathways relevant to disease

scientific article published on 08 July 2003

Gene expression profiling of de novo CD5-positive diffuse large B-cell lymphoma

scientific article published on 01 March 2003

Genomic profiles of low-grade murine gliomas evolve during progression to glioblastoma.

scientific article published on 7 April 2017

Genomic signal processing

scientific article published on September 2009

Germline copy number polymorphisms involving larger than 100 kb are uncommon in normal subjects

scientific article published on 01 February 2007

Granulocyte-colony stimulating factor attenuates striatal degeneration with activating survival pathways in 3-nitropropionic acid model of Huntington's disease

scientific article

Growing genetic regulatory networks from seed genes

scientific article published on 10 February 2004

Identification of combination gene sets for glioma classification.

scientific article

Identification of distinct basal and luminal subtypes of muscle-invasive bladder cancer with different sensitivities to frontline chemotherapy

scientific article

Identification of extracellular miRNA in human cerebrospinal fluid by next-generation sequencing

scientific article

Identification of signature genes by microarray for acute myeloid leukemia without maturation and acute promyelocytic leukemia with t(15;17)(q22;q12)(PML/RARalpha).

scientific article

Identifying targets for intervention by analyzing basins of attraction ⬇️

scientific article published on January 1, 2011

Inference from clustering with application to gene-expression microarrays

scientific article

Initial experience with genomic profiling of heavily pretreated breast cancers

scientific article published on 22 July 2014

KNOWLEDGE-ASSISTED APPROACH TO IDENTIFY PATHWAYS WITH DIFFERENTIAL DEPENDENCIES.

scientific article

Langerhans Cell Histiocytosis with Frontal Bone Indentation by an Adjoining Primary Soft Tissue Lesion in a 17-Month-Old Asian Male Child

scientific article

Learning contextual gene set interaction networks of cancer with condition specificity ⬇️

scientific article published on February 19, 2013

Leveraging Spatial Variation in Tumor Purity for Improved Somatic Variant Calling of Archival Tumor Only Samples

MicroRNA-328 is associated with (non-small) cell lung cancer (NSCLC) brain metastasis and mediates NSCLC migration

scientific article

Microarray reveals differences in both tumors and vascular specific gene expression in de novo CD5+ and CD5- diffuse large B-cell lymphomas

scientific article published on 01 January 2003

Mining molecular contexts of cancer via in-silico conditioning.

scientific article

Modeling of gene regulatory network dynamics using threshold logic

scientific article published in March 2009

Molecular Dissection of Hyperdiploid Multiple Myeloma by Gene Expression Profiling

article

Multiscale, multimodal analysis of tumor heterogeneity in IDH1 mutant vs wild-type diffuse gliomas

scientific article published on 27 December 2019

Pathway Implications of Aberrant Global Methylation in Adrenocortical Cancer

scientific article

Phenotype Classification Using Moment Features of Single-Cell Data.

scientific article

Prediction of pairwise gene interaction using threshold logic

scientific article

Probabilistic Boolean Networks: a rule-based uncertainty model for gene regulatory networks

scientific article published in February 2002

Prospective molecular profiling of canine cancers provides a clinically relevant comparative model for evaluating personalized medicine (PMed) trials

scientific article (publication date: 2014)

SCUBE1 Controls BMPR2-Relevant Pulmonary Endothelial Function: Implications for Diagnostic Marker Development in Pulmonary Arterial Hypertension

scientific article published on 04 November 2020

Stochastic transcriptional regulatory systems with time delays: a mean-field approximation

scientific article published in June 2006

Strong feature sets from small samples

scientific article published in January 2002

Systems Analysis of the Human Pulmonary Arterial Hypertension Lung Transcriptome

scientific article published on 01 June 2019

Template-based intervention in Boolean network models of biological systems

scientific article published on 19 July 2014

The application of magnets directs the orientation of neurite outgrowth in cultured human neuronal cells

scientific article

Total Extracellular Small RNA Profiles from Plasma, Saliva, and Urine of Healthy Subjects

scientific article

Uncovering the biology of multiple myeloma among African Americans: a comprehensive genomics approach

scientific article published on 19 February 2013

Zygomatic arch fracture: a new classification and treatment algorithm with epidemiologic analysis

scientific article published in July 2014

miRNA Expression Profiling in Migrating Glioblastoma Cells: Regulation of Cell Migration and Invasion by miR-23b via Targeting of Pyk2 ⬇️

scientific article published on June 22, 2012

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