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List of works by Hans-Peter Lenhof

A combinatorial approach to protein docking with flexible side chains

scientific article

A dictionary on microRNAs and their putative target pathways

scientific article published on 18 March 2010

A minimally invasive multiple marker approach allows highly efficient detection of meningioma tumors

scientific article

A new Lamarckian genetic algorithm for flexible ligand-receptor docking

scientific article

An integer linear programming approach for finding deregulated subgraphs in regulatory networks.

scientific article published on 30 December 2011

Autoantibody signature differentiates Wilms tumor patients from neuroblastoma patients

scientific article

Automated bond order assignment as an optimization problem

scientific article

BALL--biochemical algorithms library 1.3

scientific article

BALLView: a tool for research and education in molecular modeling

scientific article

BALLView: an object-oriented molecular visualization and modeling framework

scientific article

BNDB - the Biochemical Network Database

scientific article

BiNA: a visual analytics tool for biological network data

scientific article

CausalTrail: Testing hypothesis using causal Bayesian networks.

scientific article

Combination of Autoantibody Signature with PSA Level Enables a Highly Accurate Blood-Based Differentiation of Prostate Cancer Patients from Patients with Benign Prostatic Hyperplasia.

scientific article published on 3 June 2015

Combining miRNA and mRNA Expression Profiles in Wilms Tumor Subtypes

scientific article published on 30 March 2016

Complex humoral immune response against a benign tumor: frequent antibody response against specific antigens as diagnostic targets

scientific article

Computation of significance scores of unweighted Gene Set Enrichment Analyses

scientific article

Computational modeling of the sugar-lectin interaction

scientific article published on March 2004

EDISON-WMW: Exact Dynamic Programing Solution of the Wilcoxon-Mann-Whitney Test

scientific article published on 29 January 2016

Frequent overexpression of the genes FXR1, CLAPM1 and EIF4G located on amplicon 3q26-27 in squamous cell carcinoma of the lung

scientific article published on June 2007

GeneTrail--advanced gene set enrichment analysis

scientific article published on 25 May 2007

GeneTrailExpress: a web-based pipeline for the statistical evaluation of microarray experiments

scientific article

GraBCas: a bioinformatics tool for score-based prediction of Caspase- and Granzyme B-cleavage sites in protein sequences

scientific article

High-throughput miRNA profiling of human melanoma blood samples

scientific article

Identification of lung cancer with high sensitivity and specificity by blood testing

scientific article

Immunogenicity of autoantigens ⬇️

scientific article published on July 4, 2011

Improving seroreactivity-based detection of glioma

scientific article published on December 2009

Increased seroreactivity to glioma-expressed antigen 2 in brain tumor patients under radiation

scientific article

Integrated quantitative proteomic and transcriptomic analysis of lung tumor and control tissue: a lung cancer showcase

scientific article

Integrative analysis of cancer-related data using CAP.

scientific article

Multicenter study identified molecular blood-born protein signatures for Wilms Tumor

scientific article

Multiple sclerosis: microRNA expression profiles accurately differentiate patients with relapsing-remitting disease from healthy controls

scientific article

NightShift: NMR shift inference by general hybrid model training--a framework for NMR chemical shift prediction

scientific article

Novel autoantigens immunogenic in COPD patients

scientific article published on 12 March 2009

Novel immunogenic antigens increase classification accuracy in meningioma to 93.84%.

scientific article

Paired proteomics, transcriptomics and miRNomics in non-small cell lung cancers: known and novel signaling cascades

scientific article

Pattern of serum autoantibodies allows accurate distinction between a tumor and pathologies of the same organ

scientific article

Protein- versus peptide fractionation in the first dimension of two-dimensional high-performance liquid chromatography-matrix-assisted laser desorption/ionization tandem mass spectrometry for qualitative proteome analysis of tissue samples ⬇️

scientific article published on July 21, 2010

RegulatorTrail: a web service for the identification of key transcriptional regulators

scientific article published on 2 May 2017

Systematic permutation testing in GWAS pathway analyses: identification of genetic networks in dilated cardiomyopathy and ulcerative colitis.

scientific article

The Roche Cancer Genome Database (RCGDB).

scientific article

The Roche Cancer Genome Database 2.0.

scientific article

Toward an early diagnosis of lung cancer: an autoantibody signature for squamous cell lung carcinoma

scientific article

Transcriptome analysis by GeneTrail revealed regulation of functional categories in response to alterations of iron homeostasis in Arabidopsis thaliana ⬇️

scientific article published on May 18, 2011

Treatment-independent miRNA signature in blood of Wilms tumor patients

scientific article

ballaxy: web services for structural bioinformatics

scientific article (publication date: 2015)

miRNAs in lung cancer - studying complex fingerprints in patient's blood cells by microarray experiments

scientific article

miRPathDB: a new dictionary on microRNAs and target pathways

scientific article published on 13 October 2016

miRTrail--a comprehensive webserver for analyzing gene and miRNA patterns to enhance the understanding of regulatory mechanisms in diseases.

scientific article

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