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List of works by Ananth Y. Grama

2D-pattern matching image and video compression: theory, algorithms, and experiments

scientific article published in January 2002

A Distributed Classifier for MicroRNA Target Prediction with Validation Through TCGA Expression Data

scientific article published on 19 April 2018

A Unified Cloud-Native Architecture For Heterogeneous Data Aggregation And Computation

scientific article published on 10 November 2020

A convex optimization approach for identification of human tissue-specific interactomes.

scientific article published on June 2016

A fast approach to global alignment of protein-protein interaction networks.

scientific article

A geometric approach to characterize the functional identity of single cells

scientific article published on 17 April 2018

A reactive molecular dynamics simulation of the silica-water interface

scientific article published on 01 May 2010

A universal quantum circuit scheme for finding complex eigenvalues

AIKYATAN: mapping distal regulatory elements using convolutional learning on GPU

scientific article published on 07 October 2019

An efficient algorithm for detecting frequent subgraphs in biological networks

scientific article published on August 2004

An ensemble SVM model for the accurate prediction of non-canonical MicroRNA targets

scientific article published on 29 September 2015

Annotating pathways in interaction networks.

scientific article published in January 2008

Assessing significance of connectivity and conservation in protein interaction networks

scientific article published on July 2007

Cholesterol packing around lipids with saturated and unsaturated chains: a simulation study

scientific article published on 03 June 2008

Cholesterol surrogates: a comparison of cholesterol and 16:0 ceramide in POPC bilayers

scientific article published on 27 October 2006

Closing the Data Loop: An Integrated Open Access Analysis Platform for the MIMIC Database

scientific article published on September 2016

Compression of particle data from hierarchical approximate methods

scientific article published on 27 July 2002

Crack detection technique for operating wind turbine blades using Vibro-Acoustic Modulation

scientific article published in 2014

Detecting conserved interaction patterns in biological networks

scientific article published in September 2006

EP-DNN: A Deep Neural Network-Based Global Enhancer Prediction Algorithm

scientific article

Erratum to: 'MicroRNA target prediction using thermodynamic and sequence curves'.

scientific article published on 9 March 2016

Fast parallel algorithms for graph similarity and matching

scientific article published in 2014

Federation in genomics pipelines: techniques and challenges.

scientific article published on 29 August 2017

Functional annotation of regulatory pathways

scientific article

Functional characterization and topological modularity of molecular interaction networks

scientific article

Functional coherence in domain interaction networks

scientific article

Fundamental Bounds for Sequence Reconstruction from Nanopore Sequencers

scientific article published on 01 June 2016

Identifying statistical dependence in genomic sequences via mutual information estimates

scientific article published on January 2007

Inferring Temporal Information from a Snapshot of a Dynamic Network

Inferring functional information from domain co-evolution

scientific article published on 13 November 2005

Inferring the effective TOR-dependent network: a computational study in yeast

scientific article

Lateral organization in lipid-cholesterol mixed bilayers

scientific article published on 27 October 2006

MG-RAST version 4-lessons learned from a decade of low-budget ultra-high-throughput metagenome analysis

scientific article published on 26 September 2017

MicroRNA target prediction using thermodynamic and sequence curves

scientific article published on 25 November 2015

Modularity detection in protein-protein interaction networks ⬇️

scientific article published on December 29, 2011

Nonorthogonal decomposition of binary matrices for bounded-error data compression and analysis

scientific article published on 25 July 2006

Opening up the blackbox: an interpretable deep neural network-based classifier for cell-type specific enhancer predictions.

scientific article

Optimistic scheduling with service guarantees

scholarly article

Pairwise alignment of protein interaction networks

scientific article published in March 2006

Pluribus-Exploring the Limits of Error Correction Using a Suffix Tree

scientific article published on 29 June 2016

Reactive Molecular Dynamics on Massively Parallel Heterogeneous Architectures

Role of synthetic genetic interactions in understanding functional interactions among pathways.

scientific article published in January 2012

Scalable parallel formulations of the Barnes–Hut method for n-body simulations

scholarly article

Scope and limitations of yeast as a model organism for studying human tissue-specific pathways

scientific article published on 29 December 2015

Suffix-Tree Based Error Correction of NGS Reads Using Multiple Manifestations of an Error

scientific article published on 29 October 2013

The MG-RAST metagenomics database and portal in 2015

scientific article

The ReaxFF reactive force-field: development, applications and future directions

scientific article

Triangular Alignment (TAME): A Tensor-Based Approach for Higher-Order Network Alignment.

scientific article published on 28 July 2016

Universal programmable quantum circuit schemes to emulate an operator.

scientific article published in December 2012

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