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List of works by Nadia El-Mabrouk

A flexible ancestral genome reconstruction method based on gapped adjacencies ⬇️

scientific article published on December 19, 2012

A generalized Robinson-Foulds distance for labeled trees

scientific article published on 18 November 2020

Analysis of Gene Order Evolution Beyond Single-Copy Genes ⬇️

scientific article published on January 1, 2012

Ancestral Genome Organization: An Alignment Approach ⬇️

scientific article published on April 1, 2013

Approximate matching of structured motifs in DNA sequences

scientific article published in April 2005

Approximating the correction of weighted and unweighted orthology and paralogy relations

scientific article published on 11 March 2017

Duplication and inversion history of a tandemly repeated genes family

scientific article published in May 2007

Efficient Gene Tree Correction Guided by Genome Evolution

scientific article

Evolution of orthologous tandemly arrayed gene clusters ⬇️

scientific article published on October 5, 2011

Evolution of tRNA Repertoires in Bacillus Inferred with OrthoAlign

scientific article published on 6 February 2015

Evolution through segmental duplications and losses: a Super-Reconciliation approach

scientific article published on 26 May 2020

Exploring the Set of All Minimal Sequences of Reversals — An Application to Test the Replication-Directed Reversal Hypothesis

scientific article

GATC: a genetic algorithm for gene tree construction under the Duplication-Transfer-Loss model of evolution.

scientific article

Gene Tree Construction and Correction using SuperTree and Reconciliation

scientific article

Gene family evolution by duplication, speciation, and loss

scientific article published in October 2008

Gene maps linearization using genomic rearrangement distances

scientific article published in May 2007

Gene order alignment on trees with multiOrthoAlign

scientific article published on 17 October 2014

Gene tree correction for reconciliation and species tree inference ⬇️

scientific article published on November 20, 2012

Gene tree correction guided by orthology

scientific article

Gene trees and species trees: irreconcilable differences ⬇️

scientific article published on December 19, 2012

Genetic map refinement using a comparative genomic approach

scientific article published in October 2009

Genome halving and double distance with losses

scientific article published on September 1, 2011

Haplotypes histories as pathways of recombinations

scientific article published on 26 February 2004

ISMB 2020 proceedings

scientific article published on 01 July 2020

ISMB/ECCB 2019 Proceedings

scientific article published on 01 July 2019

Inferring ancestral gene orders for a family of tandemly arrayed genes

scientific article published in October 2008

Inferring the evolutionary history of gene clusters from phylogenetic and gene order data

scientific article

Orthology and paralogy constraints: satisfiability and consistency

scientific article published on 17 October 2014

Polytomy refinement for the correction of dubious duplications in gene trees

scientific article published on September 2014

Predicting the Evolution of Syntenies—An Algorithmic Review ⬇️

journal article from 'Algorithms' published in 2021

Rapid Genetic Code Evolution in Green Algal Mitochondrial Genomes.

scientific article published in April 2019

Reconstructing a SuperGeneTree minimizing reconciliation

scientific article published on 2 October 2015

Recovering haplotype structure through recombination and gene conversion

scientific article published in September 2005

The Distribution of Inversion Lengths in Bacteria

scientific article

The artiodactyl APOBEC3 innate immune repertoire shows evidence for a multi-functional domain organization that existed in the ancestor of placental mammals

scientific article

The link between orthology relations and gene trees: a correction perspective

scientific article published on 16 April 2016

The nuclear genome of Rhazya stricta and the evolution of alkaloid diversity in a medically relevant clade of Apocynaceae

scientific article published on 22 September 2016

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