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List of works by Brian Palenik

A Deg-protease family protein in marine Synechococcus is involved in outer membrane protein organization

Analysis of two marine metagenomes reveals the diversity of plasmids in oceanic environments

scientific article

Broad-host-range vector system for synthetic biology and biotechnology in cyanobacteria

scientific article

CHARACTERIZATION OF A FUNCTIONAL VANADIUM-DEPENDENT BROMOPEROXIDASE IN THE MARINE CYANOBACTERIUM SYNECHOCOCCUS SP. CC9311(1).

scientific article

Carbon sequestration in Synechococcus Sp.: from molecular machines to hierarchical modeling.

scientific article published on January 2002

Characterization of a modular, cell-surface protein and identification of a new gene family in the diatom Thalassiosira pseudonana

scientific article published on 26 December 2007

Coastal strains of marine Synechococcus species exhibit increased tolerance to copper shock and a distinctive transcriptional response relative to those of open-ocean strains

scientific article published on 05 June 2009

Comparison of the seasonal variations of Synechococcus assemblage structures in estuarine waters and coastal waters of Hong Kong

scientific article

Computational inference and experimental validation of the nitrogen assimilation regulatory network in cyanobacterium Synechococcus sp. WH 8102.

scientific article

Computational inference of regulatory pathways in microbes: an application to phosphorus assimilation pathways in Synechococcus sp. WH8102

scientific article published on 01 January 2003

Computational prediction of the osmoregulation network in Synechococcus sp. WH8102.

scientific article

Copper toxicity response influences mesotrophic Synechococcus community structure.

scientific article

Diversity and genome dynamics of marine cyanophages using metagenomic analyses

scientific article

Dynamics of marine bacterial and phytoplankton populations using multiplex liquid bead array technology

scientific article

Effect of organic compounds on cloud condensation nuclei (CCN) activity of sea spray aerosol produced by bubble bursting

Feeding and grazing impact by the bloom-forming euglenophyte Eutreptiella eupharyngea on marine eubacteria and cyanobacteria

scientific article published on 21 February 2018

Gene expression induced by copper stress in the diatom Thalassiosira pseudonana

scientific article published in July 2006

Genome of the halotolerant green alga Picochlorum sp. reveals strategies for thriving under fluctuating environmental conditions

scientific article

Genome sequence of Synechococcus CC9311: Insights into adaptation to a coastal environment

scientific article

Genomes and gene expression across light and productivity gradients in eastern subtropical Pacific microbial communities

scientific article published on 21 October 2014

Genomic island genes in a coastal marine Synechococcus strain confer enhanced tolerance to copper and oxidative stress.

scientific article published on 24 January 2013

Impact of DNA damaging agents on genome-wide transcriptional profiles in two marine Synechococcus species

scientific article published on 16 August 2013

Learning to read the oceans genomics of marine phytoplankton

scientific article published on January 2011

Microalgal assemblages in a poikilohaline pond

scientific article

Microarray analysis of phosphate regulation in the marine cyanobacterium Synechococcus sp. WH8102

article

Modern proteomes contain putative imprints of ancient shifts in trace metal geochemistry

scientific article (publication date: 21 November 2006)

Molecular mechanisms by which marine phytoplankton respond to their dynamic chemical environment

scientific article published on 03 September 2014

Multiple evolutionary origins of prochlorophytes, the chlorophyllb-containing prokaryotes ⬇️

scientific article published on January 16, 1992

Ni uptake and limitation in marine Synechococcus strains

scientific article

Niche adaptation in ocean cyanobacteria

scientific article published in Nature

Nickel utilization in phytoplankton assemblages from contrasting oceanic regimes

scientific article published on 29 January 2010

Polymerase evolution and organism evolution

scientific article published on December 1, 1992

Prochlorococcus marinus nov. gen. nov. sp.: an oxyphototrophic marine prokaryote containing divinyl chlorophyll a and b

article

PtrA is required for coordinate regulation of gene expression during phosphate stress in a marine Synechococcus

scientific article published on 08 April 2010

Reaction of O2 with a diiron protein generates a mixed-valent Fe2+/Fe3+ center and peroxide

scientific article published on 18 January 2019

Role of a microcin-C-like biosynthetic gene cluster in allelopathic interactions in marine Synechococcus

scientific article published on July 2013

Screening and characterization of polyhydroxyalkanoate granules, and phylogenetic analysis of polyhydroxyalkanoate synthase gene PhaC in cyanobacteria

scientific article published on 22 December 2020

Selection in coastal Synechococcus (cyanobacteria) populations evaluated from environmental metagenomes

scientific article

Spatial and temporal variations in Synechococcus microdiversity in the Southern California Coastal ecosystem

scientific article published on 10 November 2020

Structure of compositionally simple lipopolysaccharide from marine synechococcus

scientific article (publication date: September 2009)

Temporal dynamics of eukaryotic microbial diversity at a coastal Pacific site

scientific article published on 13 June 2018

Temporal variation of Synechococcus clades at a coastal Pacific Ocean monitoring site

scientific article

The Genome of the Diatom Thalassiosira Pseudonana: Ecology, Evolution, and Metabolism

scientific article

The Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP): illuminating the functional diversity of eukaryotic life in the oceans through transcriptome sequencing

scientific article

The genomics of symbiosis: hosts keep the baby and the bath water

scientific article

The tiny eukaryote Ostreococcus provides genomic insights into the paradox of plankton speciation

scientific article

The unexpected extremophile: Tolerance to fluctuating salinity in the green alga Picochlorum

Transcriptomic and microRNAomic profiling reveals multi-faceted mechanisms to cope with phosphate stress in a dinoflagellate

scientific article published on 26 May 2017

Use of plankton-derived vitamin B1 precursors, especially thiazole-related precursor, by key marine picoeukaryotic phytoplankton

scientific article published on 9 December 2016

Variability in protist grazing and growth on different marine Synechococcus isolates

scientific article

Whole-genome microarray analyses of Synechococcus-Vibrio interactions

scientific article published on 30 July 2009

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