Search filters

List of works by Dexter Pratt

A network-based approach to quantifying the impact of biologically active substances ⬇️

scientific article published on 02 December 2011

Assessment of network perturbation amplitudes by applying high-throughput data to causal biological networks

scientific article

Biological Expression Language

domain specific language for causal, correlative, and associative biological relations

Causal reasoning identifies mechanisms of sensitivity for a novel AKT kinase inhibitor, GSK690693.

scientific article

DDOT: A Swiss Army Knife for Investigating Data-Driven Biological Ontologies

scientific article published on 13 March 2019

Decoding of persistent multiscale structures in complex biological networks

scientific article published on 18 June 2020

Deep distributed computing to reconstruct extremely large lineage trees

scientific article published on 6 January 2022

Dynamic post-translational modification profiling of Mycobacterium tuberculosis-infected primary macrophages

scientific article published on 17 January 2020

Functional Landscape of SARS-CoV-2 Cellular Restriction

scientific article published on 30 September 2020

HiDeF: identifying persistent structures in multiscale 'omics data

scientific article published on 07 January 2021

Interpretation of cancer mutations using a multiscale map of protein systems

scientific article published on 01 October 2021

Modeling of RAS complexes supports roles in cancer for less studied partners

scientific article published on 11 August 2017

Multiscale community detection in Cytoscape

scientific article published on 23 October 2020

NDEx 2.0: A Clearinghouse for Research on Cancer Pathways.

scientific article published in November 2017

NDEx IQuery: a multi-method network gene set analysis leveraging the Network Data Exchange

scientific article published in 2023

NDEx, the Network Data Exchange

scientific article

NDEx: A Community Resource for Sharing and Publishing of Biological Networks

scientific article

NeXO Web: the NeXO ontology database and visualization platform.

scientific article

Network propagation in the cytoscape cyberinfrastructure.

scientific article published on 12 October 2017

On Crowd-verification of Biological Networks

scientific article (publication date: October 2013)

Reverse causal reasoning: applying qualitative causal knowledge to the interpretation of high-throughput data

scientific article

The Minimum Information about a Molecular Interaction Causal Statement (MI2CAST)

scientific article published on 30 June 2020

Thought Graph: Generating Thought Process for Biological Reasoning

scientific article published on 12 May 2024

ndexr - an R package to interface with the Network Data Exchange.

scientific article published on 26 October 2017

Paulina is supported by:

About Paulina

Help